api.cafevariome.org api.cafevariome.org

api.cafevariome.org

Cafe Variome

Cafe Variome

http://api.cafevariome.org/

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Cafe Variome | api.cafevariome.org Reviews

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Cafe Variome

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1

Cafe Variome

http://api.cafevariome.org/share

Advertise Your Data Via Cafe Variome "Central". Cafe Variome "Central" (available at http:/ www.cafevariome.org. Was originally designed to function as a clearinghouse and exchange portal for gene variant (mutation) data produced by diagnostics laboratories and all available variants from public repositories, offering users a portal through which to announce, discover and acquire a comprehensive listing of observed neutral and disease-causing gene variants in patients and unaffected individuals. In order...

2

Cafe Variome

http://api.cafevariome.org/about/cafevariome

What is Cafe Variome? There is a considerable need and desire for networks of diagnostic laboratories/disease consortia to be able to check each others databases for the presence of mutations and/or phenotypes they observe in their own patients. But this is countered by the understandable reluctance and impracticality of sharing the content of each group's database with other labs, or indeed with the wider world. Variants can be released using one of the following three sharing policies (fine-grained acc...

3

Cafe Variome

http://api.cafevariome.org/about/faq

What is Cafe Variome? Where can I find documentation? How can I get recognised for submitting my data? Under what conditions can I release variants? How is Cafe Variome funded? What is Cafe Variome? For a more comprehensive explanation of Cafe Variome please see our recent paper here. Our "About" page here. Or view the features and screenshots here. Please also see the following flyer. For brief overviews of the Cafe Variome concept. Where can I find documentation? Identifying and citing datasets:. Cafe ...

4

Cafe Variome

http://api.cafevariome.org/about/disclaimer

Cafe Variome "Central" Disclaimer. Cafe Variome "Central" (located at http:/ www.cafevariome.org.

5

Cafe Variome

http://api.cafevariome.org/about/features

Clean, intuitive administrators interface gives complete control over your installation. Create sources in order to group together labs/networks and subsequently control access to these sources. Fine grained access control allows setting sharing levels down to individual variant level. Bulk importer for variants offers flexible import of data in a variety of formats (e.g. Excel, tab-delimited, VCF). Customise the visual appearance including logo, fonts, background and header colours.

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Built-in Beacon functionality for Cafe Variome installations. University of Leicester - "Internet for DNA"/Beacon article. UMCG CardioKit variants - Cafe Cardio. Nature Protocols HGV2014 Blog Post. A data discovery platform for sequence variant data. Clean, intuitive interface for complete control over data discovery and subsequent data sharing. Connecting disease consortia, diagnostic networks and 3rd parties (various sharing scenarios). Installations can be hosted by Cafe Variome or installed locally.

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