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:: AGRIS Arabidopsis thaliana Web Page::The Arabidopsis Gene Regulatory Information Server
http://arabidopsis.med.ohio-state.edu/
The Arabidopsis Gene Regulatory Information Server
http://arabidopsis.med.ohio-state.edu/
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:: AGRIS Arabidopsis thaliana Web Page:: | arabidopsis.med.ohio-state.edu Reviews
https://arabidopsis.med.ohio-state.edu
The Arabidopsis Gene Regulatory Information Server
arabidopsis.med.ohio-state.edu
GRG-X
http://arabidopsis.med.ohio-state.edu/grgx
Plorer - Currently under heavy development. Please contact the developers at grgx.grotewold@gmail.com. If something doesn't work as expected. Upload a file for visualization:. Learn to use the GRG-X! Lorem ipsum dolor sit amet. Cytoscape Web will replace the contents of this div with your graph. Target is a TF. PubMed ID for Reference:.
:: AGRIS AtcisDB - Arabidopsis cis-regulatory element database::
http://arabidopsis.med.ohio-state.edu/AtcisDB
AtcisDB - Arabidopsis cis. AtcisDB provides a comprehensive resource for the scientific community working with gene regulatory information of Arabidopsis thaliana. AtcisDB consists of a searchable relational database, which includes many different data types, such as transcription factor binding site information, promoter sequence and related annotations. The data can be viewed using the Generic Genome Browser. Regulatory element annotation for each gene can also be obtained. Ie Myb, At2g30420).
:: AGRIS Cite::
http://arabidopsis.med.ohio-state.edu/cite.html
How to Cite AGRIS. The development and curation of AGRIS is fully supported by NSF. To ensure the continuation of this resource, we need users to acknowledge this resource by citing. Yilmaz A, Mejia-Guerra MK, Kurz K, Liang X, Welch L, Grotewold E. AGRIS: Arabidopsis Gene Regulatory Information Server, an update. 2011 Jan, 39(Database issue):D1118-D1122. Palaniswamy SK, James S, Sun H, Lamb RS, Davuluri RV, Grotewold E. 2006 Mar, 140(3):818-29. Elements and transcription factors. 2003 Jun, 4(1):25.
:: AGRIS People::
http://arabidopsis.med.ohio-state.edu/people.html
The Ohio State University, OH). Wilberforce Zachary Ouma,Msc (The Ohio State University, OH). Eric Maina,Msc (The Ohio State University, OH). Bull; Morgan Johnson-Brown. Bull; Leidy Mariel Cruz Gómez. Bull; Daniela Izilda Rodrigues da Silva. Bull; Fan Yang. Bull; Haidong Yu. Bull; Nan Jiang. Bull; Geraldo Felipe Ferreira Silva. Bull; Azam Abdollahzadeh.
Establishing Arabidopsis Regulatory Networks || NSF 2010 Initiative
http://arabidopsis.med.ohio-state.edu/NSF2010Project
Establishing Arabidopsis Regulatory Networks.
TOTAL PAGES IN THIS WEBSITE
12
Raina Lab - Links
http://rainalab.syr.edu/links.html
College of Arts and Sciences. The Arabidopsis Information Resource (TAlR). Arabidopsis Gene Regulatory Information Server (AGRIS). TIGR Gene Indices (TGI). Arabidopsis Stress Microarray Database (ASMD). RIKEN Arabidopsis Transcription Factor (RARTF) Database. Arabidopsis Small RNA Project (ASRP). Simple Modular Architecture Research Tool (SMART). Plant Molecular Biology (PMB). Molecular Genetics and Genomics (MGG). Trends in Plant Science. Dutta A., Chan S.H.P. Pauli N.T., R. Raina. Raina Lab Biology Dep...
AGRIS: the Arabidopsis Gene Regulatory Information Server, an update
http://nar.oxfordjournals.org/content/39/suppl_1/D1118.abstract
View Current Issue (Volume 44 Issue 14 19 August 2016). AGRIS: the Arabidopsis Gene Regulatory Information Server, an update. Department of Plant Cellular and Molecular Biology and Plant Biotechnology Center, The Ohio State University, Columbus, OH and. School of Electrical Engineering and Computer Science, Ohio University, Athens, OH, USA. To whom correspondence should be addressed. Tel: 1 614 688 4954. Fax: 1 614 292 5379. Email: yilmaz.11{at}osu.edu. September 3, 2010. October 5, 2010. October 19, 2010.
Arabidopsis Links | ABRC Outreach
http://abrcoutreach.osu.edu/arabidopsis-helpful-links
Skip to main content. Ohio State nav bar. Skip to main content. The Ohio State University. The Ohio State University. Plant Biology Teaching Resources (Higher Education). This is a great place to find new resources for teaching plant biology. ASPB Teaching Tools in Plant Biology. Greenomes provides laboratory and bioinformatics exercises to introduce students to modern plant genetics and genome research. This is a sister site to the Prep Online Lab Notebook funded by the National Science foundation.
GRASSIUS :: GrassTFDB :: Transcription Factor Database
http://www.grassius.org/grasstfdb.html
NSF Plant Genome Project. Welcome to Transcription Factor Database. That will simplify references to them as well as comparative analyses between the grasses. Please select the species to browse the transcription factors. Click on species name to view and browse TF families). Select a family from pull-down menu). Start typing and let me give gene identifier suggestions. Eg LOC Os01g01290, AC177820.3 FGT004, etc). Enter Multiple Gene IDs:. Choose program to use and database to search:.
GRASSIUS :: GrassPROMDB :: Promoter Sequence Database
http://www.grassius.org/grasspromdb.html
NSF Plant Genome Project. Welcome to Promoter Sequence Database. Search Promoters ( 149,075 sequences available ). Enter Multiple Gene IDs:. 5 kb upstream region of Maize, Sorghum and Brachypodium and 1 kb upstream region of Rice genes are available for BLAST. Choose program to use and database to search:. Default expected value is 1E-02, to adjust the paramaters manually please use advanced blast page ( link. Center for Applied Plant Sciences (CAPS).
GRASSIUS :: About
http://www.grassius.org/about.html
NSF Plant Genome Project. GRASSIUS currently contains regulatory information on maize, rice, sorghum, sugarcane and brachypodium. However, as genome sequencing and annotation efforts in other grasses continue to progress, GRASSIUS will expand to include information on them as well. The success of this endeavor is largely dependent on community contributions. Thus we hope to hear from you soon. GRASSIUS integrates information from three large databases. GrassTFDB. Gene models for existing transcription fa...
GRASSIUS :: Links
http://www.grassius.org/links.html
NSF Plant Genome Project. A Recommendation for Naming Transcription Factor Proteins in the Grasses. John Gray, Michael Bevan, Thomas Brutnell, C. Robin Buell, Karen Cone, Sarah Hake, David Jackson, Elizabeth Kellogg, Carolyn Lawrence, Susan McCouch, Todd Mockler, Stephen Moose, Andrew Paterson, Thomas Peterson, Daniel Rokshar, Glaucia Mendes Souza, Nathan Springer, Nils Stein, Marja Timmermans, Guo-Liang Wang, and Erich Grotewold. Plant Physiol. 2009 149: 4-6. [Full Text]. Maize Assembled Genomic Island.
GRASSIUS :: Community Contribution
http://www.grassius.org/commcontrib.html
NSF Plant Genome Project. This page contains links to recent GRASSIUS community contributions. Center for Applied Plant Sciences (CAPS).
GRASSIUS :: Summary
http://www.grassius.org/tf_summary.html
NSF Plant Genome Project. Transcription Factors in each species and family. Only Oryza sativa japonica. Transcription factors are counted. Center for Applied Plant Sciences (CAPS).
GRASSIUS :: Plant Genome Project
http://www.grassius.org/plantgenome.html
NSF Plant Genome Project. Abstract ( NSF IOS-1125620. Systems Approaches to Identify Gene Regulatory Networks in the Grasses. The Ohio State University, OH). Dr Andrea I Doseff. The Ohio State University, Columbus, OH). University of Toledo, Toledo, OH). Centre for Research in Agricultural Genomics [CRAG] ). The Ohio State University, OH). Dr Paula Casati ( CEFOBI, Rosario, Argentina. Iowa State University and USDA-ARS). Universidad de Puerto Rico, Mayagüez). Abstract ( NSF DBI - 0701405. Kengo Morohashi...
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گروه زیست شناسی علی آباد
گروه زیست شناسی علی آباد. گروه زیست شناسی علی آباد سومین جلسه ی گروه زیست شناسی را در تاریخ 25/2/90 روز یکشنبه برگزار. می کند حضور کلیه ی همکاران در ابن جلسه الزامی است. نوشته شده در دوشنبه نوزدهم اردیبهشت 1390ساعت 10:56 توسط مظفر کامرانی. گزارش برگزاری نمایشگاه که به مناسبت هفته معلم برگزار شد به استان ارسال گردید. همچنین گزارش برگزاری آزمون هماهنگ سال اول به استان ارسال گردید. نوشته شده در دوشنبه نوزدهم اردیبهشت 1390ساعت 10:53 توسط مظفر کامرانی. شرکت در جلسه ی استانی. ارسال سی دی آموزشی. نوشته شده در د...
ABrowse
Landmark is a record of the current location and track configuration of ABrowse. You can return to a previously created landmark by clicking it in the 'My Landmark' tab of the right information panel. Please assign a name to this landmark:. Please input Location Information. Chr:start-end" or "chr:start length") or Fasta Format Sequences. To initialize a query. Protein Coding Gene Models. Colfloral 23 small RNASeq. Burfloral 23 small RNASeq. Colfloral 16 small RNASeq. C24floral 23 small RNASeq.
Welcome
Recommended Retrofitting of ArabiSun SUN-12 and SUN-24 fixtures with LED Bulbs. Cat no. WT-02 Columbia Seed Contamination Update. Mon-Ray Shao, Vikas Shedge, Hardik Kundariya, Fredric R. Lehle, and Sally A. Mackenzie. Ws-2 Introgression in a Proportion of Arabidopsis thaliana Col-0 Stock Seed Produces Specific Phenotypes and Highlights the Importance of Routine Genetic Verification. Plant Cell 2016 28: 603-605. In addition, LEHLE SEEDS is currently implementing a new phenotype verification step in the pr...
Arabidopsis (Ara) - DeviantArt
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Eurasian Arabidopsis Stock Centre (uNASC)
New GABI-Kat lines added. New TDNA-seq stocks added for SALK, SAIL and WiscDsLox lines. Joseph R. Ecker. Homozygous sets N27946 and N27956. Joseph R. Ecker. 234 new ecotypes added. NASC distribution stats (1992-2015). Lutz/Schwechheimer RI Col-0 x Kil-0 collection. Yvon Jaillais and Greg Vert. SALK set N27954 is now available. Joseph R. Ecker. Iberian Peninsula ecotypes 1. Iberian Peninsula ecotypes 2. NASC accessions added to EURISCO. ICAR 2018 June 25-29, 2018, Turku, Finland.
arabidopsis.med.ohio-state.edu
:: AGRIS Arabidopsis thaliana Web Page::
Welcome to The Arabidopsis Gene Regulatory Information Server (AGRIS). Is a new information resource of Arabidopsis promoter sequences, transcription factors and their target genes. AGRIS currently contains three databases. Consists of approximately 33,000 upstream regions of annotated Arabidopsis genes (TAIR9 release) with a description of experimentally validated and predicted cis. Contains 17,483 direct interactions between TFs and target genes. Updated April 21, 2015). How to Cite AGRIS. AGRIS has be...
Price Request - BuyDomains
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TAIR - Home Page
EST or BAC end. Monsanto SNP and Ler Collections. The Arabidopsis Book (TAB). Mutant and Mapping Resources. GO and PO Annotations. Gene Class Symbol Registration. Online Submission for Authors and Others. Marker and Polymorphism Data. 2010 Functional Genomics Gene List. How to Post a Job. Register to Order from ABRC. Supplement to ABRC Catalog. Search ABRC DNA/Clone Stocks. Search ABRC Seed/Germplasm Stocks. ABRC Stock Order History. Search My ABRC Orders. How to Make Payments to ABRC. And funded by subs...
Eurasian Arabidopsis Stock Centre (uNASC)
New GABI-Kat lines added. New TDNA-seq stocks added for SALK, SAIL and WiscDsLox lines. Joseph R. Ecker. Homozygous sets N27946 and N27956. Joseph R. Ecker. 234 new ecotypes added. NASC distribution stats (1992-2015). Lutz/Schwechheimer RI Col-0 x Kil-0 collection. Yvon Jaillais and Greg Vert. SALK set N27954 is now available. Joseph R. Ecker. Iberian Peninsula ecotypes 1. Iberian Peninsula ecotypes 2. NASC accessions added to EURISCO. ICAR 2018 June 25-29, 2018, Turku, Finland.
ABRC Ordering | Home
This is the new face of the Arabidopsis Biological Resource Center Ordering System. Please feel free to use this site but please note that it is in beta testing. The sign up form is a very BASIC form. It will NOT be the form of the ABRC Ordering future. It is used to log in quickly and easily. You do NOT have to login or sign up in order to search for stocks.
Laboratory of Plant Molecular Biology
Institute of Biochemistry and Biophysics,. Polish Academy of Sciences. Our laboratory is interested in mechanisms of the transcriptional activation and repression of plant genes through remodeling of chromatin structure and in the biological functions of linker (H1) histones. Best viewed by Internet Explorer 5.5, Netscape Navigator 6.0, Mozilla 5.0 or higher. 800 x 600 24 bit color. Warszawski Akademicki Klub Kajakowy HABAZIE.
