Automatic extraction of protein ligand-binding affinity data. February 01, 2014. Updated the Binding MOAD data (version 2012). January 30, 2014. November 05, 2012. Updated the PDBbind data (version 2012). Last Update: December 17, 2015 (GMT 8). 15,116 entries of protein-ligand binding affinity data. AutoBind version 2.2.1. Pharmacoinformatics Lab, NTU.
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AutoBind: Automatic extraction of protein–ligand-binding affinity data | autobind.csie.ncku.edu.tw Reviews
https://autobind.csie.ncku.edu.tw
Automatic extraction of protein ligand-binding affinity data. February 01, 2014. Updated the Binding MOAD data (version 2012). January 30, 2014. November 05, 2012. Updated the PDBbind data (version 2012). Last Update: December 17, 2015 (GMT 8). 15,116 entries of protein-ligand binding affinity data. AutoBind version 2.2.1. Pharmacoinformatics Lab, NTU.
autobind.csie.ncku.edu.tw
AutoBind: Tutorial
http://autobind.csie.ncku.edu.tw/tutorial.php
Automatic extraction of protein ligand-binding affinity data. 1 Input target protein. If you can not see the graphical interfaces result on the web page, please remember to install the JAVA JDK (version 5.0 or more release). The JAVA package could be downloaded from here. 1 Input target protein. Input 4-code PDB id on the top. For example, input 1DJX in the space pressing the "search" button if you want to find out information about protein 1DJX. A) Automatically extracted binding affinity information.
AutoBind: News
http://autobind.csie.ncku.edu.tw/news.php
Automatic extraction of protein ligand-binding affinity data. February 01, 2014. Updated the Binding MOAD data (version 2012). January 30, 2014. November 05, 2012. Updated the PDBbind data (version 2012). August 04, 2012. Corrected several minor data errors. May 26, 2012. MySQL have been updated to reflect the version 5.5.22 release; and some minor bug fixes. The new (second) web version of AutoBind is released. The first version of AutoBind database is released. A total of 2399 affinities was released.
AutoBind: About
http://autobind.csie.ncku.edu.tw/about.php
Automatic extraction of protein ligand-binding affinity data. 2 Source of affinity data. This automatic retrieve system aims to extract affinity data information from scientific literature where protein crystal structures were resolved with both clearly identified and biologically relevant affinity information. Those extracted complexes with binding-affinity data will accelerate the development of structure-based drug discovery. 2 Source of affinity data. It PubMed id marked in PDB is 11007792. Besides t...
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Text Mining Group
http://iir.csie.ncku.edu.tw/index.php/menu-text-mining-group
AutoBind: Automatic extraction of protein-ligand binding affinity data from biological literature. Http:/ autobind.csie.ncku.edu.tw. IExplorePathway: an intuitive web-based network exploration system for extending existing pathways using literature-based evidences. Http:/ iexplorepathway.csie.ncku.edu.tw. DrTW: a biomedical term weighting method for document recommendation. Http:/ 140.116.247.184/ biocreative/. C2HI: a Complete CHemical Information decision system. Http:/ 140.116.247.181/C2HI/. Jiun-Huan...
Resources
http://iir.csie.ncku.edu.tw/index.php/resources
Text Mining Group Developed software:. AppSearch: A Visualized Android Apps Search System Based on Pairwise Document Similarity. Http:/ 140.116.247.56/ appfinder/. AutoBind: Automatic extraction of protein-ligand binding affinity data from biological literature. Http:/ autobind.csie.ncku.edu.tw. IExplorePathway: an intuitive web-based network exploration system for extending existing pathways using literature-based evidences. Http:/ iexplorepathway.csie.ncku.edu.tw. Http:/ 140.116.247.40/C2HI/.
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AutoBind: Automatic extraction of protein–ligand-binding affinity data
Automatic extraction of protein ligand-binding affinity data. February 01, 2014. Updated the Binding MOAD data (version 2012). January 30, 2014. November 05, 2012. Updated the PDBbind data (version 2012). Last Update: December 17, 2015 (GMT 8). 15,116 entries of protein-ligand binding affinity data. AutoBind version 2.2.1. Pharmacoinformatics Lab, NTU.
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