cgmlst.org

cgMLST.org Nomenclature Server

CgMLST.org Nomenclature Server. This server controls the allelic nomenclature of core genome MLST ( cgMLST. Bacterial gene schemes. A cgMLST scheme is a fixed and agreed upon number of genes for each species or group of closely related species that is ideally suited to standardize whole genome sequencing (WGS) based bacterial genotyping. By cgMLST very closely related genomes are 'lumped' together in a Cluster Type. CT) In addition, this server controls the allelic nomenclature of the accessory genes.

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cgMLST.org Nomenclature Server | cgmlst.org Reviews

<META> DESCRIPTION

CgMLST.org Nomenclature Server. This server controls the allelic nomenclature of core genome MLST ( cgMLST. Bacterial gene schemes. A cgMLST scheme is a fixed and agreed upon number of genes for each species or group of closely related species that is ideally suited to standardize whole genome sequencing (WGS) based bacterial genotyping. By cgMLST very closely related genomes are 'lumped' together in a Cluster Type. CT) In addition, this server controls the allelic nomenclature of the accessory genes.

<META> KEYWORDS

1 scheme

2 target count

3 strain count

4 enterococcus faecium

5 cgmlst

6 francisella tularensis

7 legionella pneumophila

8 listeria monocytogenes

9 mycobacterium tuberculosis

10 complex cgmlst

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scheme,target count,strain count,enterococcus faecium,cgmlst,francisella tularensis,legionella pneumophila,listeria monocytogenes,mycobacterium tuberculosis,complex cgmlst,staphylococcus aureus,gmbh germany,imprint

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cgMLST.org Nomenclature Server | cgmlst.org Reviews

https://cgmlst.org

CgMLST.org Nomenclature Server. This server controls the allelic nomenclature of core genome MLST ( cgMLST. Bacterial gene schemes. A cgMLST scheme is a fixed and agreed upon number of genes for each species or group of closely related species that is ideally suited to standardize whole genome sequencing (WGS) based bacterial genotyping. By cgMLST very closely related genomes are 'lumped' together in a Cluster Type. CT) In addition, this server controls the allelic nomenclature of the accessory genes.

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cgmlst.org

1

Francisella tularensis cgMLST

http://www.cgmlst.org/ncs/schema/260204

LVS (NC 007880.1, 10-JUN-2013). Sep 1, 2016 8:05 AM. M Antwerpen, Institut für Mikrobiologie der Bundeswehr, München, Germany. Antwerpen, MH, Prior, K, Mellmann, A, Höppner, S, Splettstoesser, WD, and Harmsen, D. Rapid high resolution genotyping of Francisella tularensis by whole genome sequence comparison of annotated genes ("MLST "). Implemented and maintained by Ridom.

2

Enterococcus faecium cgMLST

http://www.cgmlst.org/ncs/schema/991893

Aus0004 (NC 017022.1, 06-JUL-2013). Mar 9, 2017 3:36 PM. R Willems, University Medical Center Utrecht, the Netherlands. J Top, University Medical Center Utrecht, the Netherlands. H Westh, Hvidovre Hospital, Denmark. De Been, M, Pinholt, M, Top, J, Bletz, S, Mellmann, A, van Schaik, W, Brouwer, E, Rogers, M, Kraat, Y, Bonten, M, Corander, J, Westh, H, Harmsen, D, and Willems, RJ. Core Genome Multilocus Sequence Typing Scheme for High- Resolution Typing of Enterococcus faecium. J Clin. Microbiol.

3

Klebsiella pneumoniae/variicola/quasipneumoniae cgMLST

http://www.cgmlst.org/ncs/schema/2187931

K pneumoniae sensu lato cgMLST. NTUH-K2044 (NC 012731.1, 15-JUN-2016). Mar 10, 2017 2:20 AM. J Rossen, Department of Medical Microbiology, University of Groningen, the Netherlands. D Harmsen, University Münster, Germany. Implemented and maintained by Ridom.

4

Legionella pneumophila cgMLST

http://www.cgmlst.org/ncs/schema/1025099

Philadelphia 1 (NC 002942.5, 27-JUN-2013). Mar 10, 2017 5:55 PM. J Moran-Gilad, Public Health Services, Jerusalem, Israel. C Lück, Inst. of Medical Microbiology and Hygiene, TU, Dresden, Germany. T Harrison, Reference Microbiology Services, PHE, London, United Kingdom. Moran-Gilad, J, Prior, K, Yakunin, E, Harrison, TG, Underwood, A, Lazarovitch, T, Valinsky, L, Luck, C, Krux, F, Agmon, V, Grotto, I, and Harmsen, D. Implemented and maintained by Ridom.

5

Listeria monocytogenes cgMLST

http://www.cgmlst.org/ncs/schema/690488

EGD-e (NC 003210.1, 17-DEC-2014). Mar 9, 2017 6:02 AM. A Pietzka, AGES Graz, Austria. Ruppitsch, W, Pietzka, A, Prior, K, Bletz, S, Fernandez, HL, Allerberger, F, Harmsen, D, and Mellmann, A. Defining and Evaluating a Core Genome Multilocus Sequence Typing Scheme for Whole-Genome Sequence-Based Typing of Listeria monocytogenes. J Clin. Microbiol. Implemented and maintained by Ridom.

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cgMLST.org Nomenclature Server

CgMLST.org Nomenclature Server. This server controls the allelic nomenclature of core genome MLST ( cgMLST. Bacterial gene schemes. A cgMLST scheme is a fixed and agreed upon number of genes for each species or group of closely related species that is ideally suited to standardize whole genome sequencing (WGS) based bacterial genotyping. By cgMLST very closely related genomes are 'lumped' together in a Cluster Type. CT) In addition, this server controls the allelic nomenclature of the accessory genes.

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