creskolab.uoregon.edu

Cresko Laboratory

Ecological and Evolutionary Functional Genetics and Genomics. We still have an incomplete understanding of how changes in allele frequencies affect distributions of developmental processes in natural populations, and, once evolved, how these developmental programs alter subsequent evolutionary change. The goal of our lab is to fill this gap in our knowledge, and provide answers for numerous evolutionary questions that remain incompletely or poorly answered:. National Institute of General Medical Science.

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Cresko Laboratory | creskolab.uoregon.edu Reviews

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Ecological and Evolutionary Functional Genetics and Genomics. We still have an incomplete understanding of how changes in allele frequencies affect distributions of developmental processes in natural populations, and, once evolved, how these developmental programs alter subsequent evolutionary change. The goal of our lab is to fill this gap in our knowledge, and provide answers for numerous evolutionary questions that remain incompletely or poorly answered:. National Institute of General Medical Science.

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1 gulf pipefish genome

2 research

3 publications

4 people

5 teaching

6 software

7 protocols

8 resources

9 national science foundation

10 news brief

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Cresko Laboratory | creskolab.uoregon.edu Reviews

https://creskolab.uoregon.edu

Ecological and Evolutionary Functional Genetics and Genomics. We still have an incomplete understanding of how changes in allele frequencies affect distributions of developmental processes in natural populations, and, once evolved, how these developmental programs alter subsequent evolutionary change. The goal of our lab is to fill this gap in our knowledge, and provide answers for numerous evolutionary questions that remain incompletely or poorly answered:. National Institute of General Medical Science.

INTERNAL PAGES

creskolab.uoregon.edu

1

Cresko Laboratory: Resources

http://creskolab.uoregon.edu/resources.php

META Center For Systems Biology. The Microbial Ecology and Theory of Animals (META) Center for Systems Biology is devoted to understanding how host-microbe systems work and using this knowledge to advance human health. National Institute of General Medical Science. Is an NIH Developmental Training Grant trainee. Received Favorite Poster Award Biology Graduate Student Retreat 2015. Gave talks on ancestry of stickleback at the University of Cambridge and at Quantitative Genomics in London.

2

Cresko Laboratory: Teaching

http://creskolab.uoregon.edu/teaching.php

Foundations III: Evolution and Biodiversity. This course aims to provide students with an understanding of the history of the field of population genetics, the processes that govern the genetic composition of populations, and the spatiotemporal patterns that arise from these processes. This goal is accomplished through an exploration of the genetic mechanisms of evolutionary change within and among populations using a mixture of lectures, readings from textbooks and the primary literature, and partic...

3

Cresko Laboratory: People

http://creskolab.uoregon.edu/people.php

People in the Laboratory. William A. Cresko. I'm fascinated by the diversity of life, and the goal our lab is to understand how it arises. What genes and developmental processes are involved? How are changes in these systems integrated into genomes? How do these proximate mechanisms affect ultimate evolutionary processes? Our lab uses a combination of theoretical and empirical studies to address these and other evolutionary genetic questions. I'm interested in the genetics of adaptation, and how complex ...

4

Cresko Laboratory: Software

http://creskolab.uoregon.edu/software.php

Stacks is a software pipeline for building loci out of a set of short-read sequenced samples. Stacks was developed for the purpose of building genetic maps from RAD-Tag Illumina sequence data, but can also be readily applied to population studies, and phylogeography. National Institute of General Medical Science. Is an NIH Developmental Training Grant trainee. Received Favorite Poster Award Biology Graduate Student Retreat 2015. Presents at the U of O undergraduate symposium.

5

Cresko Laboratory: Publications

http://creskolab.uoregon.edu/publications.php

Allendorf, F.W., Bassham, S., Cresko, W.A., Limborg, M.T., Seeb, L.W., and Seeb, J.E. ( 2015. Effects of Crossovers Between Homeologs on Inheritance and Population Genomics in Polyploid-Derived Salmonid Fishes. Journal of Heredity. 217 227. [ reprint. Furin, C.G., von Hippel, F.A., Postlethwait, J.H., Buck, C.L., Cresko, W.A. and O’Hara, T.M. ( 2015. Sikkink, K.L., Reynolds, R.M., Cresko, W.A. and Phillips, P.C. ( 2015. Lescak, E.A., Marcotte, R.W., Kenney, L.A., von Hippel, F&#46...Admixture of ancient ...

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Three Good Points

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Chromosomal rearrangements maintain a polymorphic supergene controlling butterfly mimicry ». Ldquo; Supergenes are tight clusters of loci that facilitate the co-segregation of adaptive variation, providing integrated control of complex adaptive phenotypes. Polymorphic supergenes, in which specific combinations of traits are maintained within a single population, were first described for ‘pin’ and ‘thrum’ floral types in. But classic examples are also found in insect mimicry. Region. The resulting div...

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Three Good Points, "The molecular basis of eukaryotic transcription"...

http://threegoodpoints.tumblr.com/post/12960533612/the-molecular-basis-of-eukaryotic-transcription

The molecular basis of eukaryotic transcription - a lecture by Roger D. Kornberg, PNAS 2007 ». A classic primer on the mol-bio of Eukaryotic transcription. Nice discussion of the preinitiation complex. Posted 4 years ago from bookmarklet. A papers blog, from the Cresko, Phillips and Postlethwait labs at the University of Oregon. Http:/ creskolab.uoregon.edu. 2011 2016 Powered by Tumblr.

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Three Good Points, "Cyanophora paradoxa Genome Elucidates Origin of...

http://threegoodpoints.tumblr.com/post/17775115589/cyanophora-paradoxa-genome-elucidates-origin-of

Cyanophora paradoxa Genome Elucidates Origin of Photosynthesis in Algae and Plants - Price et al., Science 2012 ». What characterized the first photosynthetic eukaryotes? Posted 4 years ago from bookmarklet. A papers blog, from the Cresko, Phillips and Postlethwait labs at the University of Oregon. Http:/ creskolab.uoregon.edu. 2011 2016 Powered by Tumblr.

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Three Good Points, "Waves of Retrotransposon Expansion Remodel Genome...

http://threegoodpoints.tumblr.com/post/17672526491/waves-of-retrotransposon-expansion-remodel-genome

Waves of Retrotransposon Expansion Remodel Genome Organization and CTCF Binding in Multiple Mammalian Lineages, Cell 2012 ». The authors show that transposable elements played a major role in the evolution of CTCF binding sites. Similar results have been found in other systems (see Gunter Wagner 2012). In plants, for example, where the genome is saturated with transposable elements, it seems possible that transposons are strongly driving the evolution of cis-binding sites. 2011 2016 Powered by Tumblr.

threegoodpoints.tumblr.com

Three Good Points, "Rapid Evolution of Enormous, Multichromosomal...

http://threegoodpoints.tumblr.com/post/17775785778/rapid-evolution-of-enormous-multichromosomal

Rapid Evolution of Enormous, Multichromosomal Genomes in Flowering Plant Mitochondria with Exceptionally High Mutation Rates. Sloan et al., PLoS Biology 2012 ». From the abstract: “…the evolution of mutation rate, genome size, and chromosome structure can therefore be extremely rapid and interrelated in ways not predicted by current evolutionary theories.”. Posted 4 years ago from bookmarklet. A papers blog, from the Cresko, Phillips and Postlethwait labs at the University of Oregon.

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Three Good Points, Collecting Stickleback last week off the McKenzie...

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Collecting Stickleback last week off the McKenzie River in Eugene, Oregon ( http:/ bit.ly/mUPJ0n. Posted 5 years ago. A papers blog, from the Cresko, Phillips and Postlethwait labs at the University of Oregon. Http:/ creskolab.uoregon.edu. 2011 2016 Powered by Tumblr.

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Three Good Points

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PLoS Comp Bio: Towards a System Level Understanding of Non-Model Organisms Sampled from the Environment: A Network Biology Approach ». Posted 5 years ago. A papers blog, from the Cresko, Phillips and Postlethwait labs at the University of Oregon. Http:/ creskolab.uoregon.edu. 2011 2016 Powered by Tumblr.

stervander.com

Uncategorized Archives - Martin StervanderMartin Stervander

http://www.stervander.com/category/uncategorized

Skip to primary content. Skip to secondary content. A jumble of larks cryptic taxa and paraphyletic species galore. June 27, 2016. The original paper may be accessed for free. Through August 11 2016, using the following link: Stervander et al. 2016 MPE. A couple of years ago, Alström et al. (2013). Have been separated for 12 million years, and are not at all each other’s closest relatives, despite superficial similarities (Figure 1 middle panel). Urban Olsson, Per Alström, and others are currently lo...

evo-karma.blogspot.com

Evo-Karma: September 2010

http://evo-karma.blogspot.com/2010_09_01_archive.html

All about the good, the bad and the ugly things in life but mainly stuff about evolution, diversity of life, life forms and morphogenesis, phylogenies, trees and insects. Lots of biological news and comments. Cool discoveries of new species etc. Wednesday, September 01, 2010. 2nd UK RAD Sequencing Meeting: wrap-up #RADseq. The meeting was split into the morning session were we heard from the developers of RAD-sequencing and useful bioinformatic tools from John Davey: RADtools. Goes into further detail.

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creskolab.uoregon.edu

Cresko Laboratory

Ecological and Evolutionary Functional Genetics and Genomics. We still have an incomplete understanding of how changes in allele frequencies affect distributions of developmental processes in natural populations, and, once evolved, how these developmental programs alter subsequent evolutionary change. The goal of our lab is to fill this gap in our knowledge, and provide answers for numerous evolutionary questions that remain incompletely or poorly answered:. National Institute of General Medical Science.

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