geneorienteer.org

Gene Orienteer - Predicted Interactions

Predicted Interactions (v2.25). Arabidopsis (A. thaliana). Worm (C. elegans). Fruitfly (D. melanogaster). Human (H. sapiens). Mouse (M. musculus). Rat (R. norvegicus). Budding yeast (S. cerevisiae). Fission yeast (S. pombe). Arabidopsis example: ufo or AT4G08980. Worm example: mec-7 or ZK154.3 or WBGene00003171. Fruitfly example: Sos or CG7793 or FBgn0001965. Budding yeast example: OXP1 or S000003637. Human example: EHHADH or ADH1B or ENSG00000171791. Fission yeast example: sds22 or SPAPJ698.03c.

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Caltech

weiwei zhong

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Pas●●●ena , California, 91125

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Caltech

weiwei zhong

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Pas●●●ena , California, 91125

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Caltech

weiwei zhong

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Pas●●●ena , California, 91125

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Gene Orienteer - Predicted Interactions | geneorienteer.org Reviews

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Predicted Interactions (v2.25). Arabidopsis (A. thaliana). Worm (C. elegans). Fruitfly (D. melanogaster). Human (H. sapiens). Mouse (M. musculus). Rat (R. norvegicus). Budding yeast (S. cerevisiae). Fission yeast (S. pombe). Arabidopsis example: ufo or AT4G08980. Worm example: mec-7 or ZK154.3 or WBGene00003171. Fruitfly example: Sos or CG7793 or FBgn0001965. Budding yeast example: OXP1 or S000003637. Human example: EHHADH or ADH1B or ENSG00000171791. Fission yeast example: sds22 or SPAPJ698.03c.

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1 predicted interactions

2 gene info

3 gene pair info

4 gene name

5 species

6 gene name examples

7 flybase

8 ensembl

9 or tair

10 worm

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Gene Orienteer - Predicted Interactions | geneorienteer.org Reviews

https://geneorienteer.org

Predicted Interactions (v2.25). Arabidopsis (A. thaliana). Worm (C. elegans). Fruitfly (D. melanogaster). Human (H. sapiens). Mouse (M. musculus). Rat (R. norvegicus). Budding yeast (S. cerevisiae). Fission yeast (S. pombe). Arabidopsis example: ufo or AT4G08980. Worm example: mec-7 or ZK154.3 or WBGene00003171. Fruitfly example: Sos or CG7793 or FBgn0001965. Budding yeast example: OXP1 or S000003637. Human example: EHHADH or ADH1B or ENSG00000171791. Fission yeast example: sds22 or SPAPJ698.03c.

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geneorienteer.org

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Gene Orienteer - Predicted Interactions - Batch Processing

http://www.geneorienteer.org/singleBatch.php

Predicted Interactions (v2.25) - Batch Processing. Arabidopsis (A. thaliana). Worm (C. elegans). Fruitfly (D. melanogaster). Human (H. sapiens). Mouse (M. musculus). Rat (R. norvegicus). Budding yeast (S. cerevisiae). Fission yeast (S. pombe). Arabidopsis example: ufo or AT4G08980. Worm example: mec-7 or ZK154.3 or WBGene00003171. Fruitfly example: Sos or CG7793 or FBgn0001965. Budding yeast example: OXP1 or S000003637. Human example: EHHADH or ADH1B or ENSG00000171791. Rat example: Ada or 2741.

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GeneOrienteer Version 2.25, released on August 2011

http://www.geneorienteer.org/version.php

GeneOrienteer Version 2.25, released on August 2011. Release, Version, or Date Downloaded. Release 225, June 12, 2011. Version 3.1.78, dated June 25, 2011. Version dated June 18, 2011. June 22, 2011. June 16, 2011. Database: 4.41, July 13, 2011. June 3, 2011. Genes 63 (Sanger UK), GRCh37.p3. June 28, 2010. TAIR10: November 24, 2010. July 27, 2011. FB2011 06, dated June 24, 2011. Release 7.0 dated June 15, 2009.

3

Citing GeneOrienteer

http://www.geneorienteer.org/citing.php

Zhong W, Sternberg PW. (2006). Genome-wide prediction of C. elegans genetic interactions. Science. PDF of supplemental material.

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wormlab.rice.edu

Publications - Zhong Lab

http://wormlab.rice.edu/publications

Labocha, M.K., Jung S.K., Aleman-Meza B., Liu Z., Zhong W. (2015). WormGender - Open-Source Software for Automatic Caenorhabditis elegans. 10(9):e0139724. DOI: 10.1371/journal.pone.0139724. Aleman-Meza B., Jung S.K., Zhong W. (2015). An automated system for quantitative analysis of Drosophila larval locomotion. 15:11 DOI: 10.1186/s12861-015-0062-0. Proc Natl Acad Sci U S A. 9(1):e84830. doi:10.1371/journal.pone.0084830. Yu H, Aleman-Meza B, Gharib S, Labocha ML, Cronin CJ, Sternberg PW, Zhong W. (201...

wormlab.rice.edu

Lab Resources - Zhong Lab

http://wormlab.rice.edu/lab

Using LEDs as a low-cost source to detect GFP and DsRED. The BioRad PCR Song. A rap about gene regulation. TacoTote - 6154 Westheimer Rd. Mexican tacos, they have sweet tea. Lupe Tortilla - 2414 Southwest Freeway. Mexican restaurant. Korea Garden Restaurant - 9501 Long Point Rd. Bombay Sweets - 5827 Hillcroft St. Doneraki - 2903 Woodridge Dr. Mexican Restaurant.

gasserlab.org

Links : The Gasser Laboratory : The University of Melbourne

http://www.gasserlab.org/links.html

Faculty of Veterinary Science. Funding bodies and partners. Australian Society for Parasitology (ASP). ARC/NHMRC Parasitology Research Network. Victorian Life Sciences Computation Initiative (VLSCI). Wellcome Trust Sanger Institute. X50;rofessor Robin Gasser. X76;et-webmaster@unimelb.edu.au.

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Gene Orienteer - Predicted Interactions

Predicted Interactions (v2.25). Arabidopsis (A. thaliana). Worm (C. elegans). Fruitfly (D. melanogaster). Human (H. sapiens). Mouse (M. musculus). Rat (R. norvegicus). Budding yeast (S. cerevisiae). Fission yeast (S. pombe). Arabidopsis example: ufo or AT4G08980. Worm example: mec-7 or ZK154.3 or WBGene00003171. Fruitfly example: Sos or CG7793 or FBgn0001965. Budding yeast example: OXP1 or S000003637. Human example: EHHADH or ADH1B or ENSG00000171791. Fission yeast example: sds22 or SPAPJ698.03c.

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