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GeneTrail - GeneTrail - A Gene Set Property Analysis Tool

We present a comprehensive and efficient gene set analysis tool, called GeneTrail. We now provide the following additional analyses:. Wilcoxon-Mann-Whitney test for the distribution of SNPs (from NCBI dbSNP) and Homologues (from NCBI Homologene) in test versus reference set. ORA/GSEA for Pfam and Cath protein domains. ORA/GSEA for miRNA target genes (from Sanger miRBase). ORA/GSEA for OMIM categories. The official GeneTrailExpress paper was published in the BMC Bioinformatics journal:.

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GeneTrail - GeneTrail - A Gene Set Property Analysis Tool | genetrail.bioinf.uni-sb.de Reviews
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We present a comprehensive and efficient gene set analysis tool, called GeneTrail. We now provide the following additional analyses:. Wilcoxon-Mann-Whitney test for the distribution of SNPs (from NCBI dbSNP) and Homologues (from NCBI Homologene) in test versus reference set. ORA/GSEA for Pfam and Cath protein domains. ORA/GSEA for miRNA target genes (from Sanger miRBase). ORA/GSEA for OMIM categories. The official GeneTrailExpress paper was published in the BMC Bioinformatics journal:.
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GeneTrail - GeneTrail - A Gene Set Property Analysis Tool | genetrail.bioinf.uni-sb.de Reviews

https://genetrail.bioinf.uni-sb.de

We present a comprehensive and efficient gene set analysis tool, called GeneTrail. We now provide the following additional analyses:. Wilcoxon-Mann-Whitney test for the distribution of SNPs (from NCBI dbSNP) and Homologues (from NCBI Homologene) in test versus reference set. ORA/GSEA for Pfam and Cath protein domains. ORA/GSEA for miRNA target genes (from Sanger miRBase). ORA/GSEA for OMIM categories. The official GeneTrailExpress paper was published in the BMC Bioinformatics journal:.

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genetrail.bioinf.uni-sb.de genetrail.bioinf.uni-sb.de
1

GeneTrail - GeneTrail - A Gene Set Property Analysis Tool

http://genetrail.bioinf.uni-sb.de/about.php

GeneTrail is a web-based application that analyzes gene sets for statistically significant accumulations of genes that belong to some functional category. Considered category types are:. We provide a logfile for each supported organism containing all supported categories and database versions for the analyses performed:. Corynebacterium glutamicum ATCC 13032. GeneTrail is developed at the Chair of Bioinformatics (Head Professor Dr. Hans-Peter Lenhof). The development team consists of:.

2

GeneTrailExpress - Select file format

http://genetrail.bioinf.uni-sb.de/gte_fileformat.php

Select file format for data input:. Please activate JavaScript in your browser to be able to use all capabilities of GeneTrail! Please activate Cookies in your browser or else GeneTrail won't work! After activating JavaScript and/or Cookies, please reload this page!

3

GeneTrail - GeneTrail - A Gene Set Property Analysis Tool

http://genetrail.bioinf.uni-sb.de/papers.php

Please cite GeneTrail as. Backes, C., Keller, A., Kuentzer, J., Kneissl, B., Comtesse, N., Elnakady, Y.A., Müller, R., Meese, E., and Lenhof, H.P. GeneTrail - advanced gene set enrichment analysis. Nucleic Acid Research, Web Server Issue 2007. Please cite GeneTrailExpress as. Methodical publications describing GeneTrail. Keller, A., Backes, C., and Lenhof, H.P. Computation of significance scores of unweighted Gene Set Enrichment Analyses. BMC Bioinformatics, 2007.

4

GeneTrail - GeneTrail - A Gene Set Property Analysis Tool

http://genetrail.bioinf.uni-sb.de/index.php

Click here to try out the new GeneTrail2 web service offering up-to-date databases, more categories, support for more omics, and more enrichment algorithms. We present a comprehensive and efficient gene set analysis tool, called GeneTrail. We now provide the following additional analyses:. Wilcoxon-Mann-Whitney test for the distribution of SNPs (from NCBI dbSNP) and Homologues (from NCBI Homologene) in test versus reference set. ORA/GSEA for Pfam and Cath protein domains. ORA/GSEA for OMIM categories.

5

GeneTrail - GeneTrail - A Gene Set Property Analysis Tool

http://genetrail.bioinf.uni-sb.de/tutorial.php

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GeneTrail - GeneTrail - A Gene Set Property Analysis Tool

We present a comprehensive and efficient gene set analysis tool, called GeneTrail. We now provide the following additional analyses:. Wilcoxon-Mann-Whitney test for the distribution of SNPs (from NCBI dbSNP) and Homologues (from NCBI Homologene) in test versus reference set. ORA/GSEA for Pfam and Cath protein domains. ORA/GSEA for miRNA target genes (from Sanger miRBase). ORA/GSEA for OMIM categories. The official GeneTrailExpress paper was published in the BMC Bioinformatics journal:.

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