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Karypis Lab

clustering, data mining, bioinformatics, graph, mesh, and hypergraph partitioning software

http://glaros.dtc.umn.edu/

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Karypis Lab | glaros.dtc.umn.edu Reviews
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clustering, data mining, bioinformatics, graph, mesh, and hypergraph partitioning software
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4 bioinformatics
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8 nested disection
9 partitioning
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Karypis Lab | glaros.dtc.umn.edu Reviews

https://glaros.dtc.umn.edu

clustering, data mining, bioinformatics, graph, mesh, and hypergraph partitioning software

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1

History of Changes | Karypis Lab

http://glaros.dtc.umn.edu/gkhome/metis/parmetis/changes

ParMETIS - Parallel Graph Partitioning and Fill-reducing Matrix Ordering. Ver: 4.0.3, 3/30/2013. Fixed various issues related to wavefront diffusion (flyspray #43). Fixed issue related to the serial code for adaptive repartitioning (flyspray #95). Incorporated the latest version of Metis. Ver: 4.0.2, 10/31/2011. Updated cmake files to use mpicc/mpicxx by default and remove MPI auto-detection that has been creating problems. Fixed refinement assert failure for 0 degree vertices. Ver: 4.0, 8/4/2011. Fixed ...

2

Family of Graph and Hypergraph Partitioning Software | Karypis Lab

http://glaros.dtc.umn.edu/gkhome/views/metis

Family of Graph and Hypergraph Partitioning Software. METIS - Serial Graph Partitioning and Fill-reducing Matrix Ordering. METIS stable version: 5.1.0, 3/30/2013; MT-METIS version: 0.5.0, 8/15/2016. METIS is a set of serial programs for partitioning graphs, partitioning finite element meshes, and producing fill reducing orderings for sparse matrices. The algorithms implemented in METIS are based on the multilevel recursive-bisection, multilevel. Current stable version: 4.0.3, 3/30/2013. HMETIS is a set o...

3

Publications | Karypis Lab

http://glaros.dtc.umn.edu/gkhome/publications

I make it my practice to provide online versions of the research papers. That I have (co)-authored over the years. Besides the list bellow, information about my research papers can be found at Google Scholar. These papers have been broadly categorized into seven different areas:. Raquo; Data Mining. Includes papers on clustering, classification, pattern discovery, and graph mining. Raquo; Graph Partitioning. Raquo; Information Retrieval. Raquo; Collaborative Filtering. Raquo; Parallel Processing.

4

ParMETIS - Parallel Graph Partitioning and Fill-reducing Matrix Ordering | Karypis Lab

http://glaros.dtc.umn.edu/gkhome/metis/parmetis/overview

ParMETIS - Parallel Graph Partitioning and Fill-reducing Matrix Ordering. Current stable version: 4.0.3, 3/30/2013. Way graph-partitioning, adaptive repartitioning, and parallel multi-constrained partitioning schemes developed in our lab. ParMETIS provides the following five major functions:. Computes high quality partitionings of very large graphs quickly. Takes advantage of geometry information (when available) to reduce the partitioning time without loss in quality. Computes fill-reducing orderings of...

5

Karypis Lab | Spring 2015 office hours: T 1:00pm-2:00pm @ KHKH 4-203

http://glaros.dtc.umn.edu/gkhome/index.php

Fall 2015 office hours: Th: 1:00pm-2:00pm, KHKH 4-203. I'm George Karypis, a Professor at the Department of Computer Science and Engineering. At the University of Minnesota in the Twin Cities of Minneapolis and Saint Paul and a member of the Digital Technology Center. DTC) at the University of Minnesota. My research interests are concentrated in the areas of data mining. And from time-to-time, I look at various problems in the areas of health informatics. Education, Mentoring, and Advising. My greatest p...

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Mining and Learning with Graphs (MLG'07) - Firenze, Italy - Organization

http://mlg07.dsi.unifi.it/organization.html

Program chairs and Committees. Università degli Studi di Firenze, Italy. Massachusetts Institute of Technology, Cambridge, USA. Max Planck Institute for Biological Cybernetics, Tuebingen, Germany. Katholieke Universiteit Leuven, Belgium. Fraunhofer IAIS, Sankt Augustin, Germany. Helsinki University of Technology, Finland. University of Minnesota, Minneapolis, USA. Universiteit Leiden, The Netherlands. University of Konstanz, Germany. Katholieke Universiteit Leuven, Belgium. Osaka University, Japan. Unive...

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This page is under construction. DISCONv3.0 (Distributions of Conformations) is a software package for the NMR conformational ensemble calculations for organic molecules or small peptides. From a given set of NMR derived distances and coupling constants as well as a pre-calculated set of conformers DISCON calculates the most suitable ensemble that fits the experimental values. DISCON is usually used for the following purposes:. Structure elucidation of natural or synthetic products. Ldquo; Design, Synthe...

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Karypis Lab

I'm George Karypis, a Professor at the Department of Computer Science and Engineering. At the University of Minnesota in the Twin Cities of Minneapolis and Saint Paul and a member of the Digital Technology Center. DTC) at the University of Minnesota. My research interests are concentrated in the areas of data mining. And from time-to-time, I look at various problems in the areas of health informatics. Within these areas, my research focuses in developing novel algorithms. Tensor completion routines have ...

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