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Homolog.us

frontier in bioinformatics

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Homolog.us | homolog.us Reviews
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frontier in bioinformatics
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1 tutorials
2 navigation
3 sponsored
4 bioinformatics
5 rnaseq
6 ncrna evolution
7 crispr/cas9
8 stepik
9 nanopore
10 china
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Homolog.us | homolog.us Reviews

https://homolog.us

frontier in bioinformatics

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1

Homolog.us - Frontier in Bioinformatics

http://www.homolog.us/blogs/blog/2014/12/17/best-of-2014-my-personal-opinion

Evolution and RNA World. Best of 2014' - My Personal Opinion. Posted 17 Dec 2014. Last year, I assembled a panel of judges, who chose the best bioinformatics contributions of the year from a number of suggestions made by the readers. You can see the results in Announcing the Results of Best of 2013? 1 Succint de Bruijn Graph. Variable-Order de Bruijn Graphs. MEGAHIT: An ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph. The above is only a subset of ...

2

Homolog.us - Frontier in Bioinformatics

http://www.homolog.us/blogs/blog/2014/11/24/misassembly-detection-using-paired-end-sequence-reads-and-optical-mapping-data

Evolution and RNA World. Misassembly Detection using Paired-End Sequence Reads and Optical Mapping Data. Posted 24 Nov 2014. Appears to be promising (h/t: @lexnederbragt). We are not sure whether having optical map data is an absolute requirement. (Edit. Please see comment from senior author). If you are wondering how it relates to other available tools, the following section is helpful. The following program by Heng Li is also worth noting. Abreak: evaluating de novo assemblies.

3

Homolog.us - Frontier in Bioinformatics

http://www.homolog.us/blogs/blog/2013/07/22/two-important-papers-published-assemblathon-and-first-moleculo-genome

Evolution and RNA World. Two Important Papers Published - Assemblathon and First Genome using Moleculo. Posted 22 Jul 2013. Let us clarify at the outset that today’s ‘important’ in the title is not being used to describe the papers themselves, but rather where they were published. It shows a change in trend from the Nature-Science-Cell etc. mentality to go for the new, open-source and innovative journals to publish unusual results. The Assemblathon 2 paper came out in GigaScience. C Titus Brown’s review.

4

Homolog.us - Frontier in Bioinformatics

http://www.homolog.us/blogs/blog/2013/01/25/notes-on-assemblathon-paper

Evolution and RNA World. Notes on Assemblathon Paper. Posted 25 Jan 2013. Note Please check here for various commentaries on Assemblathon paper. Over the last two days, we have been going through the Assemblathon-2 paper and its supplements carefully, and here is what we learned so far. The following text is not a coherent discussion of the paper, but rather an assortment of mostly unrelated comments. End of Velvet Era. Number of Independent Assemblers. Cost of Genome Assembly. Energy requirement for com...

5

Homolog.us - Frontier in Bioinformatics

http://www.homolog.us/blogs/blog/2015/03/30/homolog-us-reports-from-asia-calcutta-a-new-beginning

Evolution and RNA World. Homolog.us Reports from Asia – 'Calcutta - a New Beginning? Posted 30 Mar 2015. While in India, I visited the National Institute of Biomedical Genomics (NIBMG). In Kalyani near Calcutta (marked as Kolkata in the above map). It is located in Kalyani, West Bengal, India, about 50 km. from Kolkata. Connected to Kolkata by highways, expressways and railways, it takes about one and one-half hours to reach Kalyani from Kolkata. The institute is recently established. ISI is well-respect...

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nextgenseek.com nextgenseek.com

RNA-seq Analysis

http://nextgenseek.com/category/rna-seq-analysis

Making Sense of Next-Gen Sequencing Data. You are here: Home. Archives for RNA-seq Analysis. Kallisto paper summary: Near-optimal RNA-seq quantification. May 31, 2015. Middot; 1 Comment. Middot; Tagged With: kallisto. Bayesian Approach to Single-Cell RNA-Seq Differential Expression Analysis. June 12, 2014. Middot; 1 Comment. Middot; Tagged With: DE in Single-Cell RNA-seq. July 25, 2013. Middot; Leave a Comment. Recently just started playing with TopHat, after a while back, for doing gene expression quant...

lh3.github.io lh3.github.io

BWA-MEM for long error-prone reads

http://lh3.github.io/2014/12/10/bwa-mem-for-long-error-prone-reads

BWA-MEM for long error-prone reads. A recent paper published by Phil Ashton et al. Has triggered some discussions which subsequently moved to my domain: read mapping. Phil then asked me to clarify how the upcoming bwa-mem works with Oxford Nanopore (ONT) reads. Here we go. Is also using long exact seeds. I then realized that it is also possible for the bwa-mem algorithm to work with PacBio data. With more and more interesting PacBio data sets coming out, I decided to give a try. ONT reads pose new challe...

bsiranosian.com bsiranosian.com

May | 2014 | Ben Siranosian

http://www.bsiranosian.com/2014/05

Computational discoveries from the Broad Institute and Brown University. CMap @ Broad Institute. Chromatin conformation & senescence. Monte Monster (Brown senior thesis). Tetranucleotide Usage in Mycobacteriophages. Monthly Archives: May 2014. ISCB student council 2014. May 17, 2014. May 17, 2014. This is the first chance I’ve had to present independent research, so needless to say I’m pretty excited. Continue reading →. Finished with junior year! May 14, 2014. May 14, 2014. May 11, 2014. May 14, 2014.

happykhan.com happykhan.com

About my work - Happykhan.com

http://happykhan.com/pages/about-my-work.html

Nabil-Fareed Alikhan is currently a PhD student at the University of Queensland. Working under supervision of Dr. Scott Beatson. Now i3 institute, UTS) and Dr. Nouri Ben Zakour. In the Australian Infectious Diseases Research Centre. Nabil is now finishing his PhD after completing an Honours year in Microbiology. He graduated from UQ with a Bachelor of Information Technology and a Bachelor of Science in 2008. Yes, I like referring to myself in the third person. Pathogenomics is a relatively new field of s...

happykhan.com happykhan.com

brig - Happykhan.com

http://happykhan.com/category/brig.html

BRIG Dev version (0.95-dev.0004) has been released. I've put out a development version of BRIG so that everyone can enjoy the little tweaks I've made without having to wait for a stable release. Development versions are not as heavily tested as stable releases and may have some minor bugs, please post them on one of . These are some of my favourite BRIG. Visualization of the reads selected . BRIG paper is now published. NF Alikhan, NK Petty, NL Ben Zakour, SA Beatson (2011) BLAST Ring . The Tree of Life.

happykhan.com happykhan.com

Happykhan.com

http://happykhan.com/index.html

Recognising assembly errors with REAPR. REAPR (Recognising Errors in Assemblies using Paired Reads) is a recent tool (published May 2013) released from the Berriman group at the the Sanger Institute. It's used to look for assembly errors in genome assemblies. There's a paper about it in Genome Biology. Using Pelican for websites. I recently migrated this webpage from Wordpress to Pelican. After talking to Mitchell Stanton-Cook. Shortest passwordless ssh tutorial, ever. Ssh-keygen -t dsa local. 2013 Nabil...

nextgenseq.blogspot.com nextgenseq.blogspot.com

Next-Gen Sequencing

http://nextgenseq.blogspot.com/2015/07/i-am-writing-new-lectures-and.html

A working guide to the rapidly developing world of Next-Generation DNA sequencing, with an emphasis on bioinformatics. Jul 29, 2015. I am writing new lectures and organizing a lot of teaching material to teach 4 (! Https:/ drive.google.com/open? We are also planning to make Screencast type videos of most of the lectures, which get dumped on YouTube. I will try to find some sensible way of organizing them and sharing via this NGS blog. Subscribe to: Post Comments (Atom). View my complete profile. Accurate...

happykhan.com happykhan.com

compsci - Happykhan.com

http://happykhan.com/category/compsci.html

Using Pelican for websites. I recently migrated this webpage from Wordpress to Pelican. After talking to Mitchell Stanton-Cook. Essentially it is a python application that converts text files (as md or rst) into a webpage. So basically:. Using Pelican for websites # # # # # # # # # # # # # :date: 2013-08-16 :author: nabil :category: compsci :slug: pelican-blogs I recently migrated this webpage . Shortest passwordless ssh tutorial, ever. Ssh-keygen -t dsa local. Extra html and body tags in Pelican posts.

happykhan.com happykhan.com

Archives - Happykhan.com

http://happykhan.com/archives.html

Archives for Happykhan.com. Tue 27 August 2013. Recognising assembly errors with REAPR. Sun 25 August 2013. Using Pelican for websites. Fri 23 August 2013. Shortest passwordless ssh tutorial, ever. Sun 18 August 2013. Extra html and body tags in Pelican posts. Tue 10 July 2012. BRIG Dev version (0.95-dev.0004) has been released. Tue 23 August 2011. Tue 23 August 2011. BRIG paper is now published. Sun 21 August 2011. Getting tRNAscan to work on Linux. Tue 29 March 2011. BRIG 0.90 version is out!

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RIPSA - Rede Interagencial de Informações para a Saúde

Congrega instituições responsáveis por informação em saúde no Brasil, com o objetivo de produzir subsídios para políticas públicas de saúde. Mato Grosso do Sul. Literatura de consulta RIPSA. LIS - catálogo de sites. Indicadores e Dados Básicos para a Saúde no Brasil (IDB). Base de dados IDB. Ficha de Qualificação do Indicador. Livro: Indicadores Básicos para a Saúde no Brasil. Análises e Recomendações da RIPSA. Conjunto de temas elaborados pela RIPSA. Publicações e Resoluções da RIPSA. Sobre a BVS RIPSA.

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SEFAZ GO - HOMOLOG - Credenciamento de contribuintes para emiss

homolog.sindiquimicosni.org.br homolog.sindiquimicosni.org.br

Sistema homologação

Beste forbrukslån i 2015. Grossiste Parfum Marque Montreuil. Este conteúdo está protegido por senha. Para vê-lo, digite sua senha abaixo:. Este post é protegido por senha. Digite a senha para ver os comentários.

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Telessaúde Brasil

homolog.us homolog.us

Homolog.us

Homolog.us @ Twitter. Homolog.us - Frontier in Bioinformatics. Bioinformatics Contest - 2018. It is that time of the year again. Our friends from Rosalind. And Bioinformatics Institute are hosting another bioinformatics contest with qualifying round starting on Feb. 3rd. Details below. A New Nemesis for Nanopore. Investor warning: The following post is for entertainment purposes only, and should not be considered as financial advice of any sort. In Feb 2016, we made a forecast. This is a condensed versio...

homolog.voetrips.tur.br homolog.voetrips.tur.br

Ambiente de HOMOLOGAÇÃO - VoeTrips - Travele V.2.3.1976

Usuà rio ou senha incorretos. Email nà o encontrado no banco de dados. O Email enviado com sucesso! Setor Hoteleiro Sul, Galeria do Hotel Nacional lojas 57/58. Brasília - DF. 55 61 3321 4404.

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Home - EDISAW - Editora Samael Aun Weor

Filosofia de Trabalho da Edisaw. Filosofia de Trabalho da Edisaw. E-Books Livros digitais gratuitos. Ultimos Lançamentos Acompanhe as novidades. Tratado de Alquimia Sexual As chaves da compreensão da sagrada Arte Alquímica. Existem duas alquimias: interna e externa. A Alquimia Interna trata da transformação do próprio alquimista; este livro trata essencialmente dessa. Álcool, ácidos, álcalis e muitos outros elementos bem conhecidos pela química moderna. MISTÉRIO DO ÁUREO FLORESCER.