Project 1 : TOV-SNV2. Project 2 : Automated primer design pipeline v0. Project 3 : Automated primer design pipeline v2. Project 4 : Automated primer design pipeline v3 - using Pleiades webPcr server. Primer3-2.3.5 - manual. BCR - Sep upload.
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Indels/SNV/SNP positions to Primers for Illumnia MiSeq DeepSeq | oncoapop.sdf.org Reviews
https://oncoapop.sdf.org
Project 1 : TOV-SNV2. Project 2 : Automated primer design pipeline v0. Project 3 : Automated primer design pipeline v2. Project 4 : Automated primer design pipeline v3 - using Pleiades webPcr server. Primer3-2.3.5 - manual. BCR - Sep upload.
oncoapop.sdf.org
Aparicio Lab - Primer Design Pipeline
http://oncoapop.sdf.org/primer_input.shtml
Aparicio Lab: Primer Design Pipeline. Date stamp (record locator):. Please reload the form for each submission to generate a timestamp. Or else your previous data will be overwritten. Name of Primer Design Project:. Enter the Sample ID eg (SA999):. Enter your list of hg19 SNV/SNP positions you want primers to be designed for. As formatted below to ensure accurate automated processing. Tested for up to 75 positions per submission - sample data. Tested using: Chrome, Safari but has issues on Firefox.
Aparicio Lab - Primer Design Pipeline v2
http://oncoapop.sdf.org/v2_primer_input.shtml
Aparicio Lab: Primer Design Pipeline v2. Date stamp (record locator):. Please reload the form for each submission to generate a timestamp. Or else your previous data will be overwritten. Name of Primer Design Project:. Triple Negative Breast Cancer. Enter the Sample ID eg (SA999):. Enter your list of SNV/SNP positions you want primers to be designed for. As formatted below (comma-delimited) to ensure accurate automated processing. Or by using NNN. Primers are NOT designed in any of those regions. Kindly ...
Aparicio Lab - Primer Design Pipeline v3
http://oncoapop.sdf.org/v3_primer_input.shtml
Aparicio Lab: Primer Design Pipeline v3. Date stamp (record locator):. Please reload the form for each submission to generate a timestamp. Or else your previous data will be overwritten. Name of Primer Design Project:. Triple Negative Breast Cancer. Enter the Sample ID eg (SA999):. Enter your list of SNV/SNP positions you want primers to be designed for. As formatted below (comma-delimited) to ensure accurate automated processing. Or by using NNN. Primers are NOT designed in any of those regions. Kindly ...
Amplicons for TOV-SNV2 Project
http://oncoapop.sdf.org/TOV-SNV2_summary.html
Sequences for Project: TOV-SNV2. Thu Sep 26 06:26:42 PDT 2013. ID, ANNOVAR annotation, UCSC coordinates and Amplicon Sequences for Project: TOV-SNV2. TOV-SNV2 DAH56 chr3 100467068. TOV-SNV2 DAH56 chrX 100650650. TOV-SNV2 Shared chr3 101049143. TOV-SNV2 DAH56 chr1 10177361. TOV-SNV2 Shared chr12 102131538. TOV-SNV2 DAH55 chr19 10252889. TOV-SNV2 Shared chr14 102606275. TOV-SNV2 DAH56 chr7 103216161. TOV-SNV2 DAH55 chr12 104125466. TOV-SNV2 Shared chr9 104448903. TOV-SNV2 DAH56 chr6 105405220. TOV-SNV2 DAH...
primer3 release 2.2.3 - manual
http://oncoapop.sdf.org/primer3/primer3_manual.htm
PRIMER3 RELEASE 2.2.3 MANUAL. 4 FAIR USE OF PRIMER3. 5 INSTALLATION INSTRUCTIONS - UNIX/LINUX. 6 INSTALLATION INSTRUCTIONS - Mac OSX. 7 INSTALLATION INSTRUCTIONS - WINDOWS. 8 BUILDING A Mac OSX UNIVERSAL BINARY. 10 INVOKING primer3 core. 11 COMMAND LINE ARGUMENTS. 12 INPUT AND OUTPUT CONVENTIONS. 14 HOW TO MIGRATE TAGS TO IO VERSION 4. 15 "SEQUENCE" INPUT TAGS. 16 "GLOBAL" INPUT TAGS. 17 "PROGRAM" INPUT TAGS. 18 HOW PRIMER3 CALCULATES THE PENALTY VALUE. 19 PRIMER3 SETTINGS FILE FORMAT. O PCR product size,.
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Indels/SNV/SNP positions to Primers for Illumnia MiSeq DeepSeq
Project 1 : TOV-SNV2. Project 2 : Automated primer design pipeline v0. Project 3 : Automated primer design pipeline v2. Project 4 : Automated primer design pipeline v3 - using Pleiades webPcr server. Primer3-2.3.5 - manual. BCR - Sep upload.
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