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Chloroplast Phenomics | Michigan State University

As the site of photosynthesis, the chloroplast is the defining organelle of green plants and may be thought of as the world’s life-support system. We have chosen it for functional genomics studies because it produces many molecules important to agriculture and human health yet is similar in complexity to a bacterial cell. Click to Learn More. Recent publications from the project:. Gu, L, A.D. Jones and R.L. Last. Yang, Y., T.L. Sage, Y. Liu, T.R. Ahmad, W.F. Marshall, S...Plant Cell 23: 1861-1875 .

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Chloroplast Phenomics | Michigan State University | plastid.msu.edu Reviews

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As the site of photosynthesis, the chloroplast is the defining organelle of green plants and may be thought of as the world’s life-support system. We have chosen it for functional genomics studies because it produces many molecules important to agriculture and human health yet is similar in complexity to a bacterial cell. Click to Learn More. Recent publications from the project:. Gu, L, A.D. Jones and R.L. Last. Yang, Y., T.L. Sage, Y. Liu, T.R. Ahmad, W.F. Marshall, S&#4...Plant Cell 23: 1861-1875 .

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1 Plastid Arabidopsis functional genomics Functional genomics Arabidopsis genomics Chloroplast Plant lipid Plant amino acid Arabidopsis 2010 High throughput genetics Chloroplast proteome Vitamin E Tocopherol Chloroplast morphology Plant Biochemistry

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Chloroplast Phenomics | Michigan State University | plastid.msu.edu Reviews

https://plastid.msu.edu

As the site of photosynthesis, the chloroplast is the defining organelle of green plants and may be thought of as the world’s life-support system. We have chosen it for functional genomics studies because it produces many molecules important to agriculture and human health yet is similar in complexity to a bacterial cell. Click to Learn More. Recent publications from the project:. Gu, L, A.D. Jones and R.L. Last. Yang, Y., T.L. Sage, Y. Liu, T.R. Ahmad, W.F. Marshall, S&#4...Plant Cell 23: 1861-1875 .

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plastid.msu.edu

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Chloroplast Phenomics | Michigan State University

http://plastid.msu.edu/links/index.html

Fellowship for Interpretation of Genomes. David Meinke: SeedGenes Project. Klaas van Wijk: Plastid Proteome Database. Supplemental Materials from Shannon Bell's Dissertation. Arabidopsis thaliana Insertional Database. SUBA: the Arabidopsis Subcellular Database. SeedGenes functional genomics of seed development. Chloroplast Phenomics' is a collaborative Arabidopsis functional genomics project funded by Nation. And Western Michigan University. Did you find a bug or an error? Please let us know.

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Chloroplast 2010 | Michigan State University

http://plastid.msu.edu/about/overview.html

Overview of the project. The Chloroplast Phenomics Database hosts data from three related projects:. Computational and Experimental Studies of Plastid Functional Networks. PI: Shin-Han Shiu, co-PI: Rob Last, starting date September 2011. The long-term goal is to understand the gene functional networks that regulate plastid functions and plant response to environmental perturbations. Our specific aims are:. Establish PNG transcriptional networks. Enhance the value of existing PNG mutant phenotypic data:.

3

Chloroplast 2010 | Michigan State University

http://plastid.msu.edu/about/gene_list.html

The original list of genes being targeted for analysis by our project contained 4455 nuclear genes that were identified as likely to encode plastid-targeted proteins. We have adopted an inclusive approach to predicting plastid targeting to minimize false negatives, recognizing the likelihood of false positives. The 28,952 sequences in the TIGR A.thaliana proteome (release 5) were processed by TargetP. At the Plant Energy Biology Centre of Excellence in Australia. When mutated. This updated list of ta...

4

Chloroplast 2010 | Michigan State University

http://plastid.msu.edu/about/protocols.html

To access PDF format descriptions of the protocols that we use for each assay, please click on the links below. Leaf Fatty Acid Methyl Esters (FAMEs). Leaf Amino Acid Assay. And the HLPC-MS/MS method. Seed Amino Acid Assay. And the HLPC-MS/MS method. Morphology and Physiology Assays:. And examples of images. That correspond to different controlled vocabulary terms). And examples of seeds. That correspond to different controlled vocabulary terms). Chlorophyll Fluorescence Kinetics Assay. Please let us know.

5

Chloroplast Phenomics | Michigan State University

http://plastid.msu.edu/index.html

As the site of photosynthesis, the chloroplast is the defining organelle of green plants and may be thought of as the world’s life-support system. We have chosen it for functional genomics studies because it produces many molecules important to agriculture and human health yet is similar in complexity to a bacterial cell. Click to Learn More. Recent publications from the project:. Gu, L, A.D. Jones and R.L. Last. Yang, Y., T.L. Sage, Y. Liu, T.R. Ahmad, W.F. Marshall, S&#4...Plant Cell 23: 1861-1875 .

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Chloroplast Phenomics | Michigan State University

As the site of photosynthesis, the chloroplast is the defining organelle of green plants and may be thought of as the world’s life-support system. We have chosen it for functional genomics studies because it produces many molecules important to agriculture and human health yet is similar in complexity to a bacterial cell. Click to Learn More. Recent publications from the project:. Gu, L, A.D. Jones and R.L. Last. Yang, Y., T.L. Sage, Y. Liu, T.R. Ahmad, W.F. Marshall, S&#4...Plant Cell 23: 1861-1875 .

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