cagef.utoronto.ca
Genomics | CAGEF Centre for the Analysis of Genome Evolution & Function
http://www.cagef.utoronto.ca/services/next-generation-genomics
We provide both Next Generation Sequencing with the Illumina system and high throughput Sanger sequencing with the 48 capillary AB system. Along with standard sequencing, we also perform CAGEF-developed techniques:. Identifies the causative lesion in Arabidopsis EMS generated mutants. Provides highly informative concatenated short sequence reads of variable regions of the 16S rRNA gene for microbiome research. Illumina NextSeq500 Desktop Sequencer v2. Illumina MiSeq Personal Sequencer v2.
cagef.utoronto.ca
Transcriptomics | CAGEF Centre for the Analysis of Genome Evolution & Function
http://www.cagef.utoronto.ca/services/transcriptomics
Our transcriptomics platform consists of both traditional microarray and Illumina RNA-Seq services. Affymetrix GeneChip Transcriptome Profiling System. GeneChips currently available in house:. Arabidopsis genome tiling array 1.0R. Can also interrogate user provided:. Genome tiling arrays for ChIP-chip studies. Custom arrays designed for resequencing. Illumina Solexa Genome Analyzer IIx with Paired End capabilities. Next generation high-throughput genome analyzer can be applied to:. Thakur S, Guttman DS.
cagef.utoronto.ca
Quantitative Interactor Screening with next-generation Sequencing (QIS-Seq) identifies Arabidopsis thaliana MLO2 as a target of the Pseudomonas syringae type III effector HopZ2 | CAGEF Centre for the Analysis of Genome Evolution & Function
http://www.cagef.utoronto.ca/quantitative-interactor-screening-with-next-generation-sequencing-qis-seq-identifies-arabidopsis-thaliana-mlo2-as-a-target-of-the-pseudomonas-syringae-type-iii-effector-hopz2-2
Quantitative Interactor Screening with next-generation Sequencing (QIS-Seq) identifies Arabidopsis thaliana MLO2 as a target of the Pseudomonas syringae type III effector HopZ2. Quantitative Interactor Screening with next-generation Sequencing (QIS-Seq) identifies Arabidopsis thaliana MLO2 as a target of the Pseudomonas syringae type III effector HopZ2. Lewis JD, Wan J, Ford R, Gong Y, Fung P, Nahal H, Wang PW, Desveaux D, Guttman DS. BMC Genomics 2012 ;13():8. Thakur S, Guttman DS. The auxin response fa...
cagef.utoronto.ca
Services | CAGEF Centre for the Analysis of Genome Evolution & Function
http://www.cagef.utoronto.ca/services
CAGEF maintains a variety of state-of-the-art equipment allowing us to provide a range of services for your research needs. All services include an initial consultation and help with study design. A De-Novo Genome Analysis Pipeline (DeNoGAP) for large-scale comparative prokaryotic genomics studies. Thakur S, Guttman DS. Genomic screens identify a new phytobacterial microbe-associated molecular pattern and the cognate Arabidopsis receptor-like kinase that mediates its immune elicitation.
cagef.utoronto.ca
Next-generation mapping of Arabidopsis genes | CAGEF Centre for the Analysis of Genome Evolution & Function
http://www.cagef.utoronto.ca/next-generation-mapping-of-arabidopsis-genes
Next-generation mapping of Arabidopsis genes. Next-generation mapping of Arabidopsis genes. Austin RS, Vidaurre D, Stamatiou G, Breit R, Provart NJ, Bonetta D, Zhang J, Fung P, Gong Y, Wang PW, McCourt P, Guttman DS. Plant J. 2011 Aug;67(4):715-25. Population. This method, called Next Generation Mapping (NGM), uses a chastity statistic to quantify the relative contribution of the parental mutant and mapping lines to each SNP in the pooled F? Lines and a single channel of Illumina Genome Analyzer data....
gf.eeb.utoronto.ca
Niagara College | Growth Facilities
http://gf.eeb.utoronto.ca/2012-aergc-meeting/niagara-college
Faculty of Arts and Science University of Toronto. Dept of Eco and Evo Biology. Dept of Cell and Systems Biology. Growth Facilities are located in. Earth Science Centre and Ramsay Wright building, serving EEB and CSB. Proudly powered by WordPress.
gf.eeb.utoronto.ca
2012 AERGC Meeting | Growth Facilities
http://gf.eeb.utoronto.ca/2012-aergc-meeting
Faculty of Arts and Science University of Toronto. Thank you to all the Speakers, Attendees, and Sponsors who helped making this year’s annual meeting a success. It was a wonderful privilege to have you all with us here at the University of Toronto. Keep an eye on the AERGC website for information on next year’s meeting! Http:/ www.aergc.org. Dept of Eco and Evo Biology. Dept of Cell and Systems Biology. Growth Facilities are located in. Earth Science Centre and Ramsay Wright building, serving EEB and CSB.
evoecolab.wordpress.com
Links | Evolutionary Ecology
https://evoecolab.wordpress.com/links
Marc Johnson's Lab. 1 Evolution of Plant Defence. 2 Consequences of Plant Asexual Reproduction. 3 Effects of Evolution on Soil Ecosystems. 4 Latitudinal Gradients in Herbivory and Plant Defence. Biology Department at UTM. Ecology and Evolutionary Biology at UofT. 8220;Hot Student Paper”. CAGEF – Centre for the Analysis of Genome Evolution and Function. 8212;————–. Free sequence editting/alignment software). Common protocols for molecular biology. Courtesy of Mark Rausher’s lab). By Joe Felsenstein ….
inlewis.wordpress.com
About – Ilona Naujokaitis-Lewis
https://inlewis.wordpress.com/about
Climate data and scenarios: resources for applied ecologists. Previously, I was a Postdoctoral Research Associate with Ben Zuckerberg. In his Climate Change Ecology Lab Department of Forestry and Wildlife Ecology University of Wisconsin-Madison. In collaboration with the Upper Midwest and Great Lakes Landscape Conservation Cooperative. I completed my PhD with Dr. Marie-Josee Fortin in her Spatial Ecology Lab. Department of Ecology and Evolutionary Biology. Powered by WordPress.com.
utbeat.biology.utoronto.ca
UTBEAT - The U of T Biology Environmental Action Team
http://utbeat.biology.utoronto.ca/resources.html
1) Never printed on both sides of a sheet of paper before? Check out our guide to double-sided printing. 2) Want to run an event without disposable dishes? This guide to alternatives to non-disposable dishes on campus. EEB, CSB, and Forestry now accept double-sided theses. If you plan to take advantage of the new rules, take a look at our short guide to thesis double-siding. And avoid a few common pitfalls. To T-Space are available on the ETD website. UTBEAT has developed a recommended syllabus blurb.
